de.mpg.biochem.mars.io

Class MoleculeArchiveIOFactory

java.lang.Object

de.mpg.biochem.mars.io.MoleculeArchiveIOFactory

public class MoleculeArchiveIOFactory
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
MoleculeArchiveIOFactory()

Method Summary

Modifier and Type	Method and Description
MoleculeArchiveAmazonS3Source	openAWSS3SourceWithEndpoint(java.lang.String s3Url, java.lang.String endpointUrl) Open an MoleculeArchiveSource for AWS S3.
MoleculeArchiveFSSource	openFSSource(java.io.File file) Open an MoleculeArchiveSource for MoleculeArchive filesystem.
MoleculeArchiveSource	openSource(java.lang.String url) Open an MoleculeArchiveSource based on some educated guessing from the url.
MoleculeArchiveSource	openSource(java.net.URI uri) Open an MoleculeArchiveSource for MoleculeArchive filesystem.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MoleculeArchiveIOFactory

public MoleculeArchiveIOFactory()

Method Detail

openAWSS3SourceWithEndpoint

public MoleculeArchiveAmazonS3Source openAWSS3SourceWithEndpoint(java.lang.String s3Url,
                                                                 java.lang.String endpointUrl)
                                                          throws java.io.IOException

Open an MoleculeArchiveSource for AWS S3.

Parameters:

s3Url - url to the amazon s3 object

endpointUrl - endpoint url for the server

Returns:

the MoleculeArchiveAmazonS3Reader

Throws:

java.io.IOException - the io exception

openFSSource

public MoleculeArchiveFSSource openFSSource(java.io.File file)
                                     throws java.io.IOException

Open an MoleculeArchiveSource for MoleculeArchive filesystem.

Parameters:

file - archive file

Returns:

the MoleculeArchiveFSSource

Throws:

java.io.IOException - the io exception

openSource

public MoleculeArchiveSource openSource(java.net.URI uri)
                                 throws java.io.IOException

Open an MoleculeArchiveSource for MoleculeArchive filesystem.

Parameters:

uri - archive location

Returns:

the MoleculeArchiveFSSource

Throws:

java.io.IOException - the io exception

openSource

public MoleculeArchiveSource openSource(java.lang.String url)
                                 throws java.io.IOException

Open an MoleculeArchiveSource based on some educated guessing from the url.

Parameters:

url - archive location

Returns:

the N5Reader

Throws:

java.io.IOException - the io exception