de.mpg.biochem.mars.object

Class MartianObject

java.lang.Object

de.mpg.biochem.mars.molecule.AbstractJsonConvertibleRecord

de.mpg.biochem.mars.molecule.AbstractMarsRecord

de.mpg.biochem.mars.molecule.AbstractMolecule

de.mpg.biochem.mars.object.MartianObject

All Implemented Interfaces:

JsonConvertibleRecord, MarsRecord, Molecule

public class MartianObject
extends AbstractMolecule

Field Summary

Fields inherited from class de.mpg.biochem.mars.molecule.AbstractMarsRecord

parent

Constructor Summary

Constructors

Constructor and Description
MartianObject()
MartianObject(com.fasterxml.jackson.core.JsonParser jParser)
MartianObject(java.lang.String UID)
MartianObject(java.lang.String UID, MarsTable dataTable)

Method Summary

Modifier and Type	Method and Description
protected void	createIOMaps() Must be implemented in subclasses to define how fields, objects, arrays should be saved based on the Jackson streaming API.
PeakShape	getShape(int t)
java.util.Set<java.lang.Integer>	getShapeKeys()
boolean	hasShape(int t)
void	merge(MartianObject martianObject) Used to merge another MartianObject record into this one.
void	putShape(int t, PeakShape shape)
void	removeShape(int t)

Methods inherited from class de.mpg.biochem.mars.molecule.AbstractMolecule

addTag, getChannel, getImage, getMetadataUID, getSegmentsTable, getSegmentsTable, getSegmentsTable, getSegmentsTableNames, getTable, hasSegmentsTable, hasSegmentsTable, merge, putPosition, putRegion, putSegmentsTable, putSegmentsTable, removeSegmentsTable, removeSegmentsTable, removeSegmentsTable, setChannel, setImage, setMetadataUID, setParameter, setParameter, setParameter, setTable

Methods inherited from class de.mpg.biochem.mars.molecule.AbstractMarsRecord

addNote, getBooleanParameter, getNotes, getParameter, getParameters, getPosition, getPositionNames, getPositions, getRegion, getRegionNames, getRegions, getStringParameter, getTags, getTagsArray, getUID, hasBooleanParameter, hasDoubleParameter, hasNoTags, hasParameter, hasPosition, hasRegion, hasStringParameter, hasTag, merge, removeAllParameters, removeAllPositions, removeAllRegions, removeAllTags, removeParameter, removePosition, removeRegion, removeTag, setNotes, setParent

Methods inherited from class de.mpg.biochem.mars.molecule.AbstractJsonConvertibleRecord

dumpJSON, fromJSON, getJsonGenerator, getJsonParser, setJsonField, setShowWarnings, toJSON

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface de.mpg.biochem.mars.molecule.MarsRecord

addNote, getBooleanParameter, getNotes, getParameter, getParameters, getPosition, getPositionNames, getPositions, getRegion, getRegionNames, getRegions, getStringParameter, getTags, getTagsArray, getUID, hasBooleanParameter, hasDoubleParameter, hasNoTags, hasParameter, hasPosition, hasRegion, hasStringParameter, hasTag, merge, removeAllParameters, removeAllPositions, removeAllRegions, removeAllTags, removeParameter, removePosition, removeRegion, removeTag, setNotes, setParent

Methods inherited from interface de.mpg.biochem.mars.molecule.JsonConvertibleRecord

dumpJSON, fromJSON, getJsonGenerator, getJsonParser, setJsonField, setShowWarnings, toJSON

Constructor Detail

MartianObject

public MartianObject()

MartianObject

public MartianObject(com.fasterxml.jackson.core.JsonParser jParser)
              throws java.io.IOException

Throws:

java.io.IOException

MartianObject

public MartianObject(java.lang.String UID)

MartianObject

public MartianObject(java.lang.String UID,
                     MarsTable dataTable)

Method Detail

putShape

public void putShape(int t,
                     PeakShape shape)

hasShape

public boolean hasShape(int t)

getShape

public PeakShape getShape(int t)

removeShape

public void removeShape(int t)

getShapeKeys

public java.util.Set<java.lang.Integer> getShapeKeys()

merge

public void merge(MartianObject martianObject)

Used to merge another MartianObject record into this one.

Parameters:

martianObject - MartianObject to merge into this one.

createIOMaps

protected void createIOMaps()

Description copied from class: AbstractJsonConvertibleRecord

Must be implemented in subclasses to define how fields, objects, arrays should be saved based on the Jackson streaming API.

Overrides:

createIOMaps in class AbstractMolecule