de.mpg.biochem.mars.molecule

Class DnaMolecule

java.lang.Object

de.mpg.biochem.mars.molecule.AbstractJsonConvertibleRecord

de.mpg.biochem.mars.molecule.AbstractMarsRecord

de.mpg.biochem.mars.molecule.AbstractMolecule

de.mpg.biochem.mars.molecule.DnaMolecule

All Implemented Interfaces:

JsonConvertibleRecord, MarsRecord, Molecule

public class DnaMolecule
extends AbstractMolecule

Field Summary

Fields inherited from class de.mpg.biochem.mars.molecule.AbstractMarsRecord

parent

Constructor Summary

Constructors

Constructor and Description
DnaMolecule()
DnaMolecule(com.fasterxml.jackson.core.JsonParser jParser)
DnaMolecule(java.lang.String UID)
DnaMolecule(java.lang.String UID, MarsTable dataTable)

Method Summary

Methods inherited from class de.mpg.biochem.mars.molecule.AbstractMolecule

addTag, createIOMaps, getChannel, getImage, getMetadataUID, getSegmentsTable, getSegmentsTable, getSegmentsTable, getSegmentsTableNames, getTable, hasSegmentsTable, hasSegmentsTable, merge, putPosition, putRegion, putSegmentsTable, putSegmentsTable, removeSegmentsTable, removeSegmentsTable, removeSegmentsTable, setChannel, setImage, setMetadataUID, setParameter, setParameter, setParameter, setTable

Methods inherited from class de.mpg.biochem.mars.molecule.AbstractMarsRecord

addNote, getBooleanParameter, getNotes, getParameter, getParameters, getPosition, getPositionNames, getPositions, getRegion, getRegionNames, getRegions, getStringParameter, getTags, getTagsArray, getUID, hasBooleanParameter, hasDoubleParameter, hasNoTags, hasParameter, hasPosition, hasRegion, hasStringParameter, hasTag, merge, removeAllParameters, removeAllPositions, removeAllRegions, removeAllTags, removeParameter, removePosition, removeRegion, removeTag, setNotes, setParent

Methods inherited from class de.mpg.biochem.mars.molecule.AbstractJsonConvertibleRecord

dumpJSON, fromJSON, getJsonGenerator, getJsonParser, setJsonField, setShowWarnings, toJSON

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface de.mpg.biochem.mars.molecule.MarsRecord

addNote, getBooleanParameter, getNotes, getParameter, getParameters, getPosition, getPositionNames, getPositions, getRegion, getRegionNames, getRegions, getStringParameter, getTags, getTagsArray, getUID, hasBooleanParameter, hasDoubleParameter, hasNoTags, hasParameter, hasPosition, hasRegion, hasStringParameter, hasTag, merge, removeAllParameters, removeAllPositions, removeAllRegions, removeAllTags, removeParameter, removePosition, removeRegion, removeTag, setNotes, setParent

Methods inherited from interface de.mpg.biochem.mars.molecule.JsonConvertibleRecord

dumpJSON, fromJSON, getJsonGenerator, getJsonParser, setJsonField, setShowWarnings, toJSON

Constructor Detail

DnaMolecule

public DnaMolecule()

DnaMolecule

public DnaMolecule(com.fasterxml.jackson.core.JsonParser jParser)
            throws java.io.IOException

Throws:

java.io.IOException

DnaMolecule

public DnaMolecule(java.lang.String UID)

DnaMolecule

public DnaMolecule(java.lang.String UID,
                   MarsTable dataTable)