de.mpg.biochem.mars.molecule.commands

Class BuildArchiveFromTableCommand

java.lang.Object

org.scijava.module.AbstractModule

org.scijava.module.DefaultMutableModule

org.scijava.command.DynamicCommand

de.mpg.biochem.mars.molecule.commands.BuildArchiveFromTableCommand

All Implemented Interfaces:

java.lang.Runnable, org.scijava.Cancelable, org.scijava.command.Command, org.scijava.Contextual, org.scijava.Initializable, org.scijava.module.Module, org.scijava.module.MutableModule, org.scijava.plugin.SciJavaPlugin

public class BuildArchiveFromTableCommand
extends org.scijava.command.DynamicCommand
implements org.scijava.Initializable

Field Summary

Fields inherited from class org.scijava.command.DynamicCommand

moduleService, pluginService

Constructor Summary

Constructors

Constructor and Description
BuildArchiveFromTableCommand()

Method Summary

Modifier and Type	Method and Description
SingleMoleculeArchive	getArchive()
java.lang.String	getMoleculeIdColumn()
MarsTable	getTable()
void	initialize()
void	run()
void	setMoleculeIdColumn(java.lang.String columnName)
void	setTable(MarsTable table)

Methods inherited from class org.scijava.command.DynamicCommand

cancel, context, getCancelReason, getContext, getInfo, getInput, getOutput, isCanceled, saveInputs, setContext, setInput, setOutput, uncancel

Methods inherited from class org.scijava.module.AbstractModule

cancel, getDelegateObject, getInputs, getOutputs, isInputResolved, isOutputResolved, preview, resolveInput, resolveOutput, setInputs, setOutputs, unresolveInput, unresolveOutput

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.scijava.module.MutableModule

addInput, addInput, addOutput, addOutput, removeInput, removeOutput

Methods inherited from interface org.scijava.module.Module

cancel, getDelegateObject, getInputs, getOutputs, isInputResolved, isOutputResolved, isResolved, preview, resolveInput, resolveOutput, setInputs, setOutputs, setResolved, unresolveInput, unresolveOutput

Constructor Detail

BuildArchiveFromTableCommand

public BuildArchiveFromTableCommand()

Method Detail

initialize

public void initialize()

Specified by:

initialize in interface org.scijava.Initializable

Specified by:

initialize in interface org.scijava.module.Module

Overrides:

initialize in class org.scijava.module.AbstractModule

run

public void run()

Specified by:

run in interface java.lang.Runnable

Specified by:

run in interface org.scijava.module.MutableModule

getArchive

public SingleMoleculeArchive getArchive()

setTable

public void setTable(MarsTable table)

getTable

public MarsTable getTable()

setMoleculeIdColumn

public void setMoleculeIdColumn(java.lang.String columnName)

getMoleculeIdColumn

public java.lang.String getMoleculeIdColumn()