- lastBrowsePath - Variable in class de.mpg.biochem.mars.swingUI.MoleculeArchiveSelector.AbstractMoleculeArchiveDialog
-
- LENGTH - Static variable in class de.mpg.biochem.mars.image.DNASegment
-
- LevenbergMarquardt - Class in de.mpg.biochem.mars.util
-
- LevenbergMarquardt() - Constructor for class de.mpg.biochem.mars.util.LevenbergMarquardt
-
- linearRegression(String, String) - Method in class de.mpg.biochem.mars.table.MarsTable
-
Calculates the linear fit given an xColumn and yColumn pair.
- linearRegression(String, String, double, double) - Method in class de.mpg.biochem.mars.table.MarsTable
-
Calculates the linear fit given an xColumn and yColumn pair.
- linearRegression(double[], double[], int, int) - Static method in class de.mpg.biochem.mars.util.MarsMath
-
- list(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveAmazonS3KeyValueAccess
-
- list(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveAmazonS3Source
-
- list(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveFSSource
-
- list(String) - Method in interface de.mpg.biochem.mars.io.MoleculeArchiveStorage
-
List all groups (including datasets) in a group.
- listDirectories(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveAmazonS3KeyValueAccess
-
- listDirectories(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveAmazonS3Source
-
- listDirectories(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveFSSource
-
- listDirectories(String) - Method in interface de.mpg.biochem.mars.io.MoleculeArchiveStorage
-
List all groups (including datasets) in a group.
- listFiles(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveAmazonS3Source
-
- listFiles(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveFSSource
-
- listFiles(String) - Method in interface de.mpg.biochem.mars.io.MoleculeArchiveStorage
-
List all groups (including datasets) in a group.
- listObjectKeys(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveAmazonS3KeyValueAccess
-
- load(MoleculeArchiveSource) - Method in class de.mpg.biochem.mars.molecule.AbstractMoleculeArchive
-
- loaderExecutor - Variable in class de.mpg.biochem.mars.swingUI.MoleculeArchiveSelector.AbstractMoleculeArchiveDialog
-
- loadVirtualStore(MoleculeArchiveSource) - Method in class de.mpg.biochem.mars.molecule.AbstractMoleculeArchive
-
- localize(float[]) - Method in class de.mpg.biochem.mars.image.DNASegment
-
- localize(double[]) - Method in class de.mpg.biochem.mars.image.DNASegment
-
- localize(float[]) - Method in class de.mpg.biochem.mars.image.Peak
-
- localize(double[]) - Method in class de.mpg.biochem.mars.image.Peak
-
- localize(float[]) - Method in class de.mpg.biochem.mars.image.PeakPixel
-
- localize(double[]) - Method in class de.mpg.biochem.mars.image.PeakPixel
-
- lock(String) - Method in interface de.mpg.biochem.mars.molecule.MoleculeArchiveWindow
-
Lock the MoleculeArchive window to prevent changes from being made at the
same time as calculations are running on the archive.
- lock() - Method in interface de.mpg.biochem.mars.molecule.MoleculeArchiveWindow
-
Lock the MoleculeArchive window to prevent changes from being made at the
same time as calculations are running on the archive.
- LockedChannel - Interface in de.mpg.biochem.mars.io
-
A lock on a path that can create a Reader, Writer,
InputStream, or OutputStream.
- lockForReading(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveAmazonS3KeyValueAccess
-
- lockForWriting(String) - Method in class de.mpg.biochem.mars.io.MoleculeArchiveAmazonS3KeyValueAccess
-
- log - Variable in class de.mpg.biochem.mars.metadata.AbstractMarsMetadata
-
- log(String) - Method in class de.mpg.biochem.mars.metadata.AbstractMarsMetadata
-
Add to the log that contains the history of processing steps conducted on
this dataset and the associated molecule records contained in the same
MoleculeArchive.
- log(String) - Method in interface de.mpg.biochem.mars.metadata.MarsMetadata
-
Add to the log that contains the history of processing steps conducted on
this dataset and the associated molecule records contained in the same
MoleculeArchive.
- log - Variable in class de.mpg.biochem.mars.metadata.OLDMarsMetadata
-
- log(String) - Method in class de.mpg.biochem.mars.metadata.OLDMarsMetadata
-
- log(String) - Method in class de.mpg.biochem.mars.molecule.AbstractMoleculeArchive
-
Add a log message to all metadata records.
- log(String) - Method in interface de.mpg.biochem.mars.molecule.MoleculeArchive
-
Add a log message to all MarsImageMetadata records.
- log(String) - Method in interface de.mpg.biochem.mars.molecule.MoleculeArchiveWindow
-
Add a message to the log that is presented in the background of the lock
screen.
- LogBuilder - Class in de.mpg.biochem.mars.util
-
- LogBuilder() - Constructor for class de.mpg.biochem.mars.util.LogBuilder
-
- logln(String) - Method in class de.mpg.biochem.mars.metadata.AbstractMarsMetadata
-
Add to the log that contains the history of processing steps conducted on
this dataset and the associated molecule records contained in the same
MoleculeArchive.
- logln(String) - Method in interface de.mpg.biochem.mars.metadata.MarsMetadata
-
Add to the log that contains the history of processing steps conducted on
this dataset and the associated molecule records contained in the same
MoleculeArchive.
- logln(String) - Method in class de.mpg.biochem.mars.metadata.OLDMarsMetadata
-
- logln(String) - Method in class de.mpg.biochem.mars.molecule.AbstractMoleculeArchive
-
Add a log message to all metadata records.
- logln(String) - Method in interface de.mpg.biochem.mars.molecule.MoleculeArchive
-
Add a log message to all MarsImageMetadata records.
- logln(String) - Method in interface de.mpg.biochem.mars.molecule.MoleculeArchiveWindow
-
Add a message and start a new line in the log that is presented in the
background of the lock screen.